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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GART, phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
Sequence ID:NM_000819
NM_001136005
NM_001136006
NM_175085
RefSeqGene ID:NG_029160
Entrez Gene ID:2618
Ensembl ID:ENSG00000159131

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 34876273 - 34915125

 Exon Info From UCSC:
NM_000819
NM_001136005
NM_001136006
NM_175085

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6701741Full LengthBC107712phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780294  NP_000810  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000819 NP_000810 P22102 EC 2.1.2.2
EC 6.3.3.1
EC 6.3.4.13
Formyl_trans_N
AIRS
GARS_A
AIRS_C
GARS_C
GARS_N
NM_001136005 NP_001129477      
NM_001136006 NP_001129478      
NM_175085 NP_780294     GARS_A
GARS_C
GARS_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M32082 AAA60077 P22102 EC 2.1.2.2
EC 6.3.3.1
EC 6.3.4.13
AF008655 AAB71834 O14660  
BC038958 AAH38958 P22102 EC 2.1.2.2
EC 6.3.3.1
EC 6.3.4.13
BC093641 AAH93641 P22102 EC 2.1.2.2
EC 6.3.3.1
EC 6.3.4.13
BC101565 AAI01566 P22102 EC 2.1.2.2
EC 6.3.3.1
EC 6.3.4.13
BC107712 AAI07713 Q3B7A7  
D32051 BAA06809 Q15374  
AB208785 BAD92022 Q59HH3  
AK292560 BAF85249 P22102 EC 2.1.2.2
EC 6.3.3.1
EC 6.3.4.13
AK292897 BAF85586 P22102 EC 2.1.2.2
EC 6.3.3.1
EC 6.3.4.13
AK295980 BAG58755 B4DJ93  
X54199 CAA38119 P22102 EC 2.1.2.2
EC 6.3.3.1
EC 6.3.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GART NP_000810 R.norvegicus Gart 288259   NP_001011899 87
M.musculus Gart 14450 Gene Info NP_034386 86
A.gambiae AgaP_AGAP009786 1279199   XP_318881 54
N.crassa NCU00177 3872565   XP_956400 50
S.pombe ade1 2541034   NP_596304 50
D.melanogaster ade3 33986   NP_523497 48
S.cerevisiae ADE5,7 852617   NP_011280 46
C.elegans GARS\/AIRS\/GART 180935   NP_509122 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)