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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CH25H, cholesterol 25-hydroxylase
Sequence ID:NM_003956
Entrez Gene ID:9023
Ensembl ID:ENSG00000138135

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 90965704 - 90967059

NM_003956 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
313789096569590967070

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4619357Full LengthBC017843cholesterol 25-hydroxylase
5589142Full LengthBC072430cholesterol 25-hydroxylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003947  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003956 NP_003947 O95992 EC 1.14.99.38 Sterol_desat

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF059214 AAC97483 O95992 EC 1.14.99.38
BC017843 AAH17843 O95992 EC 1.14.99.38
BC072430 AAH72430 O95992 EC 1.14.99.38
DQ892026 ABM82952    
DQ895218 ABM86144    
AK314865 BAG37380 O95992 EC 1.14.99.38

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CH25H NP_003947 R.norvegicus Ch25h 309527   NP_001020586 81
M.musculus Ch25h 12642 Gene Info NP_034020 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)