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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CH25H, cholesterol 25-hydroxylase
Sequence ID:NM_003956
Entrez Gene ID:9023
Ensembl ID:ENSG00000138135

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 90965704 - 90967059

NM_003956 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4619357Full LengthBC017843cholesterol 25-hydroxylase
5589142Full LengthBC072430cholesterol 25-hydroxylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003947  

Protein Infomation

NM_003956 NP_003947 O95992 EC Sterol_desat

Related Sequences

AF059214 AAC97483 O95992 EC
BC017843 AAH17843 O95992 EC
BC072430 AAH72430 O95992 EC
DQ892026 ABM82952    
DQ895218 ABM86144    
AK314865 BAG37380 O95992 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CH25H NP_003947 R.norvegicus Ch25h 309527   NP_001020586 81
M.musculus Ch25h 12642 Gene Info NP_034020 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)