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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TPD52L2, Tumor protein D52-like 2
Sequence ID:NM_199360
NM_199362
NM_199361
NM_003288
NM_199363
NM_001243895
NM_199359
NM_001243891
NM_001243892
NM_001243894
RefSeqGene ID:NG_029863
Entrez Gene ID:7165
Ensembl ID:ENSG00000101150

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.2-q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 62514101 - 62522890

 Exon Info From UCSC:
NM_199360
NM_199362
NM_199361
NM_003288
NM_199363
NM_199359

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3446037Full LengthBC006804tumor protein D52-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_955393  NP_955391  NP_955395  NP_955394  NP_003279  NP_955392  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243891 NP_001230820    
NM_001243892 NP_001230821    
NM_001243894 NP_001230823    
NM_001243895 NP_001230824    
NM_003288 NP_003279 Q6FGS1
O43399
TPD52
NM_199359 NP_955391 Q68E05 TPD52
NM_199360 NP_955392 Q5JWU6 TPD52
NM_199361 NP_955393   TPD52
NM_199362 NP_955394   TPD52
NM_199363 NP_955395   TPD52

Related Sequences

 
mRNAGenPeptSwissProt
AF004429 AAC98477 O43399
AF004430 AAC98478 O43399
BC006804 AAH06804 Q6FGS1
O43399
AY323819 AAQ95044 Q5J908
BT019631 AAV38437 O43399
DQ891121 ABM82047  
DQ894300 ABM85226  
AB062396 BAB93483  
AK223031 BAD96751 Q53GA0
AK314501 BAG37101 Q6FGS1
AK055068 BAG51460 O43399
AK293349 BAG56865 B4DDV4
AK297064 BAG59585 Q68E05
AK298366 BAG60608 B4DPJ6
CR542036 CAG46833 Q6FGS1
O43399
CR749208 CAH18065 Q68E05

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TPD52L2 NP_955392 R.norvegicus Tpd52l2 296480   NP_942039 91
M.musculus Tpd52l2 66314 Gene Info NP_079758 91
A.gambiae AgaP_AGAP004868 1275088   XP_314318 36
D.melanogaster CG5174 37117   NP_725793 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)