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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHACTR3, phosphatase and actin regulator 3
Sequence ID:NM_001199505
NM_001199506
NM_080672
NM_183244
NM_183246
RefSeqGene ID:NG_029537
Entrez Gene ID:116154
Ensembl ID:ENSG00000087495

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.32-q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 58296264 - 58422766

 Exon Info From UCSC:
NM_080672
NM_183244
NM_183246

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4179728Full LengthBC108303phosphatase and actin regulator 3
40125913Full LengthBC117362phosphatase and actin regulator 3
40125915Full LengthBC117364phosphatase and actin regulator 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_899069  NP_899067  NP_542403  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199505 NP_001186434    
NM_001199506 NP_001186435    
NM_080672 NP_542403 Q96KR7 RPEL
NM_183244 NP_899067   RPEL
NM_183246 NP_899069   RPEL

Related Sequences

 
mRNAGenPeptSwissProt
BC108303 AAI08304 Q96KR7
BC117362 AAI17363 Q96KR7
BC117364 AAI17365 Q96KR7
HQ258286 ADR83040  
AB098521 BAC82348 Q96KR7
AB098522 BAC82349 Q96KR7
AK314493 BAG37093 Q96KR7
AK091632 BAG52395 B3KRI3
AK295459 BAH12075 B7Z339
AK316047 BAH14418 Q96KR7
AJ311122 CAC67489 Q96KR7
AJ617581 CAF04087 Q96KR7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHACTR3 NP_542403 R.norvegicus Phactr3 362284   NP_999624 89
M.musculus Phactr3 74189 Gene Info NP_001171261 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)