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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CASS4, Cas scaffolding protein family member 4
Sequence ID:NM_001164114
NM_001164115
NM_001164116
NM_020356
Entrez Gene ID:57091
Ensembl ID:ENSG00000087589

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 54987167 - 55033836

 Exon Info From UCSC:
NM_001164114
NM_001164115
NM_001164116
NM_020356

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5205865Full LengthBC027951Cas scaffolding protein family member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065089  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164114 NP_001157586    
NM_001164115 NP_001157587    
NM_001164116 NP_001157588    
NM_020356 NP_065089 Q9NQ75 SH3_1

Related Sequences

 
mRNAGenPeptSwissProt
BC027951 AAH27951 Q9NQ75
AK027760 BAB55351 Q9NQ75
AK295613 BAG58496 B4DII4
AJ276678 CAC00655 Q9NQ75

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CASS4 NP_001157586 M.musculus Cass4 320664 Gene Info NP_001074289 63
R.norvegicus Cass4 296409   XP_230891 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)