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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTPS1, CTP synthase 1
Sequence ID:NM_001905
Entrez Gene ID:1503
Ensembl ID:ENSG00000171793

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 41448832 - 41477451

 Exon Info From UCSC:
NM_001905

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3355881Full LengthBC009408CTP synthase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001896  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001905 NP_001896 P17812 EC 6.3.4.2 GATase
CTP_synth_N
Peptidase_C26

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC009408 AAH09408 P17812 EC 6.3.4.2
AK297386 BAG59827 B4DMB5  
AK299122 BAG61176 B4DR64  
AK303797 BAG64752 B4E1E0  
AK304817 BAH14260 B7Z9C4  
X52142 CAA36386 P17812 EC 6.3.4.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTPS NP_001896 M.musculus Ctps 51797 Gene Info NP_058028 98
R.norvegicus Ctps 313560   NP_001128345 97
D.melanogaster CG6854 39645   NP_730023 67
A.gambiae AgaP_AGAP009624 1279000   XP_318656 63
A.thaliana emb2742 820447   NP_187873 60
S.cerevisiae URA8 853567   NP_012637 58
C.elegans W06H3.3 189267   NP_507243 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)