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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH22, cadherin 22, type 2
Sequence ID:NM_021248
Entrez Gene ID:64405
Ensembl ID:ENSG00000149654

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 44802375 - 44828142

 Exon Info From UCSC:
NM_021248

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020516Full LengthBC136526cadherin-like 22
4777641IncompleteBC039056cadherin-like 22

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067071  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021248 NP_067071 Q9UJ99 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF035300 AAB88183 Q9UJ99
BC031232 AAH31232 Q49AS4
BC136526 AAI36527 Q9UJ99
AK289584 BAF82273 A8K0L9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH22 NP_067071 M.musculus Cdh22 104010 Gene Info NP_778153 95
R.norvegicus Cdh22 29182   NP_062034 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)