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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTNNBL1, catenin, beta like 1
Sequence ID:NM_030877
Entrez Gene ID:56259
Ensembl ID:ENSG00000132792

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.23-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 36488722 - 36500520

 Exon Info From UCSC:
NM_030877

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40116943Full LengthBC121005catenin, beta like 1
40116944Full LengthBC121006catenin, beta like 1
5443781IncompleteBC022802catenin, beta like 1
5575697IncompleteBC036739catenin, beta like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_110517  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030877 NP_110517 Q8WYA6 DUF1716

Related Sequences

 
mRNAGenPeptSwissProt
BC022802 AAH22802 Q8WYA6
BC121005 AAI21006 Q0VAM0
BC121006 AAI21007 Q8WYA6
AF367471 AAK53407 Q8WYA6
AF239607 AAL69567 Q8WYA6
AF370431 AAQ15267 Q8WYA6
AK024761 BAB14992 Q8WYA6
AK074663 BAC11121 Q8WYA6
AK222592 BAD96312 Q8WYA6
AK293420 BAG56927 B4DE16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTNNBL1 NP_110517 R.norvegicus Ctnnbl1 296320   NP_001020041 97
M.musculus Ctnnbl1 66642 Gene Info NP_079956 96
A.gambiae AgaP_AGAP001357 1281825   XP_321789 61
D.melanogaster CG11964 41068   NP_649847 59
C.elegans M01E11.2 172214   NP_491634 48
A.thaliana AT3G02710 821269   NP_186920 43
N.crassa NCU05117 3873250   XP_957103 37
S.pombe SPAC1952.06c 2542555   NP_594808 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)