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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. MACF1, microtubule-actin crosslinking factor 1
Sequence ID:NM_012090
Entrez Gene ID:23499
Ensembl ID:ENSG00000127603

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32-p31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 39765985 - 39952654

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3625464IncompleteBC007330microtubule-actin crosslinking factor 1
4607069IncompleteBC107866microtubule-actin crosslinking factor 1
6497156IncompleteBC071925microtubule-actin crosslinking factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036222  

Protein Infomation

NM_012090 NP_036222 Q9UPN3 efhand

Related Sequences

BC007330 AAH07330 Q96IQ1
BC071925 AAH71925 Q6IPG6
BC107866 AAI07867 Q32Q32
AF317696 AAL09459 Q9UPN3
AB007934 BAA32310 Q9UPN3
AB029290 BAA83821 Q9UPN3
AB033077 BAA86565 Q9UPN3
AK023285 BAB14509 Q9H8U2
AK127519 BAC87016 Q6ZSD7
AK297854 BAG60186 B4DNC4
AK299010 BAG61091 B4DQX9
AK304414 BAG65245 B4E2T3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens MACF1 NP_036222 M.musculus Macf1 11426 Gene Info NP_033730 92
R.norvegicus Macf1 362587   NP_001129230 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)