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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHMP4B, charged multivesicular body protein 4B
Sequence ID:NM_176812
RefSeqGene ID:NG_015820
Entrez Gene ID:128866
Ensembl ID:ENSG00000101421

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CATARACT, POSTERIOR POLAR, 3 

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 32399164 - 32441691

NM_176812 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13553239910932399463
3565333243627232436449
5346483243875732438871
6497753243988232440008
77616473244130132442172

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5173394Full LengthBC033859chromatin modifying protein 4B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_789782  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_176812 NP_789782 Q9H444 ESCRT-III

Related Sequences

 
mRNAGenPeptSwissProt
BC033859 AAH33859 Q9H444
AY329085 AAQ91194 Q9H444
AB100261 BAC79375 Q9H444

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHMP4B NP_789782 M.musculus Chmp4b 75608 Gene Info NP_083638 100
A.gambiae AgaP_AGAP005316 1276026   XP_315330 69
C.elegans vps-32.1 174091   NP_495337 63
D.melanogaster shrb 35933   NP_610462 62
C.elegans vps-32.2 183288   NP_505022 56
S.pombe vps32 2542922   NP_594271 44
A.thaliana SNF7.2 816502   NP_179573 43
S.cerevisiae SNF7 850712   NP_013125 40
N.crassa NCU01282 3876971   XP_960819 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)