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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MAPRE1, microtubule-associated protein, RP/EB family, member 1
Sequence ID:NM_012325
Entrez Gene ID:22919
Ensembl ID:ENSG00000101367

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.1-q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 31407759 - 31436754

NM_012325 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11363140769831407833
1372603141373031413853
2614063142152231421667
4076143142443931424646
6157363142754031427661
7378893143442331434575
89026223143647731438209

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6527006Full LengthBC106068microtubule-associated protein, RP/EB family, member 1
40031641Full LengthBC109281microtubule-associated protein, RP/EB family, member 1
40120302IncompleteBC128442microtubule-associated protein, RP/EB family, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036457  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012325 NP_036457 Q15691 CH
EB1

Related Sequences

 
mRNAGenPeptSwissProt
U24166 AAC09471 Q15691
BC106068 AAI06069 Q15691
BC109281 AAI09282 Q15691
BC128442 AAI28443 A2VCR0
EU832776 ACE87787  
GQ129296 ACT64430  
AK312590 BAG35484 Q15691
AK297273 BAG59745 B4DM33

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MAPRE1 NP_036457 M.musculus Mapre1 13589 Gene Info NP_031922 97
R.norvegicus Mapre1 114764   NP_612518 97
N.crassa NCU00243 3873964   XP_957714 44
A.thaliana EB1C 836862   NP_201528 42
S.cerevisiae BIM1 856736   NP_010932 41
S.pombe mal3 2542123   NP_593678 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)