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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. POLR3F, polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
Sequence ID:NM_006466
Entrez Gene ID:10621
Ensembl ID:ENSG00000132664

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 18448034 - 18465284

NM_006466 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11801844803218448211
1812981844958718449704
2993661845348518453552
3674341845403418454101
4355471845571818455830
5486911846068118460824
6927991846104518461152
8009911846226218462453
99221511846412418465283

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4069767Full LengthBC016761polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
4285347Full LengthBC012588polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006457  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006466 NP_006457 Q9H1D9 RNA_pol_Rpc34

Related Sequences

 
mRNAGenPeptSwissProt
U93869 AAB63677 Q9H1D9
BC012588 AAH12588 Q9H1D9
BC016761 AAH16761 Q05DB8
DQ892695 ABM83621  
DQ896169 ABM87168  
AK223298 BAD97018 Q53FI8
AK290892 BAF83581 Q9H1D9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POLR3F NP_006457 M.musculus Polr3f 70408 Gene Info NP_084039 99
R.norvegicus Polr3f 311487   NP_001101254 99
D.melanogaster CG5380 42619   NP_651029 52
A.gambiae AgaP_AGAP011973 1280696   XP_320558 51
C.elegans W09C3.4 172081   NP_491427 36
S.pombe rpc34 2538992   NP_588398 34
S.cerevisiae RPC34 855737   NP_014400 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)