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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FERMT1, fermitin family member 1
Sequence ID:NM_017671
RefSeqGene ID:NG_016213
Entrez Gene ID:55612
Ensembl ID:ENSG00000101311

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
KINDLER SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:20p12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 6055491 - 6104191

 Exon Info From UCSC:
NM_017671

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4941567Full LengthBC035882fermitin family homolog 1 (Drosophila)
5277060Full LengthBC040545fermitin family homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060141  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017671 NP_060141 Q54A15
Q9BQL6
PH

Related Sequences

 
mRNAGenPeptSwissProt
BC035882 AAH35882 Q9BQL6
BC040545 AAH40545 Q49AC8
AY137240 AAM94174 Q9BQL6
AF443278 AAN75822 Q54A15
Q9BQL6
AK000123 BAA90957 Q9BQL6
AK000747 BAA91358 Q9BQL6
AK092195 BAC03826 Q9BQL6
AB105105 BAD12269 Q54A15
AK314394 BAG37018 B2RAX1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FERMT1 NP_060141 R.norvegicus Fermt1 296179   NP_001099985 89
M.musculus Fermt1 241639 Gene Info NP_932146 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)