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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PSMF1, proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
Sequence ID:NM_006814
NM_178578
NM_178579
Entrez Gene ID:9491
Ensembl ID:ENSG00000125818

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 1145935 - 1147965

 Exon Info From UCSC:
NM_006814
NM_178578

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992178Full LengthBC126462proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
5171973IncompleteBC029836proteasome (prosome, macropain) inhibitor subunit 1 (PI31)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006805  NP_848693  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006814 NP_006805 Q92530 PI31_Prot_Reg
NM_178578 NP_848693 Q92530 PI31_Prot_Reg

Related Sequences

 
mRNAGenPeptSwissProt
BC126462 AAI26463 Q92530
HQ258165 ADR82919  
D88378 BAA13603 Q92530
AK294134 BAG57462 B4DFK1
AK300667 BAG62352 B4DUJ0
AK302164 BAG63531 B4DXW9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMF1 NP_006805 R.norvegicus Psmf1 689852   NP_001094475 87
M.musculus Psmf1 228769 Gene Info NP_997611 84
A.gambiae AgaP_AGAP007418 1269770   XP_308420 34
D.melanogaster CG8979 36277   NP_725093 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)