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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SNED1, Sushi, nidogen and EGF-like domains 1
Sequence ID:NM_001080437
Entrez Gene ID:25992
Ensembl ID:ENSG00000162804

Database Links

UniGeneEntrez GeneEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 241979543 - 242032489

 Exon Info From UCSC:
NM_001080437

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9093265IncompleteBC169202FLJ00133 protein

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080437 NP_001073906 Q8TER0  

Related Sequences

 
mRNAGenPeptSwissProt
BC027939 AAH27939 Q8TER0
AF439717 AAQ04558 Q8TER0
AF439718 AAQ04563 Q8TER0
AK074062 BAB84888 Q8TER0
AK074075 BAB84901 Q8TER0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNED1 NP_001073906 M.musculus Sned1 208777 Gene Info NP_766051 85
R.norvegicus Sned1 316638   NP_001161314 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)