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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CAPRIN1, cell cycle associated protein 1
Sequence ID:NM_005898
NM_203364
Entrez Gene ID:4076
Ensembl ID:ENSG00000135387

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 34122794 - 34123289

 Exon Info From UCSC:
NM_005898
NM_203364

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3355481Full LengthBC001731cell cycle associated protein 1
3907023IncompleteBC015700cell cycle associated protein 1
4280890IncompleteBC026302cell cycle associated protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005898 NP_005889 Q14444  
NM_203364 NP_976240    

Related Sequences

 
mRNAGenPeptSwissProt
BC001731 AAH01731 Q14444
EU176701 ABW03502  
EU176359 ABW03810  
EU176467 ABW03918  
AK127972 BAG54610 B3KXU8
AK299720 BAG61620 B4DSF8
Z48042 CAA88096 Q14444
BK001101 DAA01118 Q14444
BK001104 DAA01121 Q14444
BR000867 FAA00692 Q14444

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CAPRIN1 NP_005889 M.musculus Caprin1 53872 Gene Info NP_001104759 97
R.norvegicus Caprin1 362173   NP_001012185 97
D.melanogaster CG18811 59172   NP_652671 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)