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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. FARSB, phenylalanyl-tRNA synthetase, beta subunit
Sequence ID:NM_005687
Entrez Gene ID:10056
Ensembl ID:ENSG00000116120

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 223436402 - 223520792

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4664949Full LengthBC017783phenylalanyl-tRNA synthetase, beta subunit
2820530IncompleteBC006502phenylalanyl-tRNA synthetase, beta subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005678  

Protein Infomation

NM_005687 NP_005678 Q9NSD9 EC B3_4

Related Sequences

AF042346 AAD02220 Q9NSD9 EC
AF161521 AAF29136 Q9NSD9 EC
BC006502 AAH06502 Q9BR63  
BC017783 AAH17783 Q9NSD9 EC
D84430 BAA95608 Q9NSD9 EC
AK291531 BAF84220 A8K666  
AK294158 BAG57481 B4DFM0  
AK316497 BAH14868 B7ZB32  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens FARSB NP_005678 M.musculus Farsb 23874 Gene Info NP_035941 94
R.norvegicus Farsb 301544   NP_001004252 93
D.melanogaster CG5706 42888   NP_651237 63
A.gambiae AgaP_AGAP003517 1274174   XP_313256 63
C.elegans frs-2 174351   NP_495785 60
A.thaliana AT1G72550 843587   NP_177399 51
N.crassa NCU08888 3874973   XP_958826 49
S.pombe frs1 2541974   NP_594442 48
S.cerevisiae FRS1 850749   NP_013161 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)