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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RNF25, ring finger protein 25
Sequence ID:NM_022453
Entrez Gene ID:64320
Ensembl ID:ENSG00000163481

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 219528614 - 219536699

NM_022453 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
7677219528587219529257
678812219529461219529595
813905219529877219529969
9061049219530638219530781
10501121219530881219530952
11221191219532634219532703
11921259219532801219532868
12601362219532961219533063
13631437219533327219533401
14381566219536652219536780

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4811222Full LengthBC015612ring finger protein 25

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071898  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022453 NP_071898 Q96BH1 zf-C3HC4
RWD

Related Sequences

 
mRNAGenPeptSwissProt
BC015612 AAH15612 Q96BH1
JF432200 ADZ15417  
AK023968 BAB14743 Q96BH1
AK222525 BAD96245 Q96BH1
AK289501 BAF82190 Q96BH1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNF25 NP_071898 R.norvegicus Rnf25 301515   NP_001012004 85
M.musculus Rnf25 57751 Gene Info NP_067288 83
A.gambiae AgaP_AGAP012333 1280367   XP_320214 37
D.melanogaster CG13344 36541   NP_610915 35
A.thaliana AT3G60300 825201   NP_191589 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)