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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BCS1L, BC1 (ubiquinol-cytochrome c reductase) synthesis-like
Sequence ID:NM_001079866
NM_001257342
NM_001257343
NM_001257344
NM_004328
RefSeqGene ID:NG_008018
Entrez Gene ID:617
Ensembl ID:ENSG00000074582

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
BJORNSTAD SYNDROME 
GRACILE SYNDROME 
LEIGH SYNDROMECOX15
DLD
FOXRED1
NDUFA10
NDUFA12
NDUFA2
NDUFA9
NDUFAF2
NDUFAF6
NDUFS3
NDUFS4
NDUFS7
NDUFS8
NDUFV1
SDHA
SURF1
MITOCHONDRIAL COMPLEX III DEFICIENCYTTC19
UQCRB
UQCRQ

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 219524459 - 219528166

 Exon Info From UCSC:
NM_001079866
NM_004328

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961496Full LengthBC000416BCS1-like (yeast)
2961496Full LengthBC007500BCS1-like (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004319  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079866 NP_001073335    
NM_001257342 NP_001244271    
NM_001257343 NP_001244272    
NM_001257344 NP_001244273    
NM_004328 NP_004319 Q9Y276 AAA

Related Sequences

 
mRNAGenPeptSwissProt
AF038195 AAB97365 Q9Y276
AF026849 AAD08638 Q9Y276
BC000416 AAH00416 Q9Y276
BC007500 AAH07500 Q9Y276
DQ891877 ABM82803  
DQ895064 ABM85990  
EF672347 ABV24964 A8BSR7
EU832594 ACE86996  
EU832513 ACE87685  
AK223518 BAD97238 Q53EX1
AK289363 BAF82052 A8JZZ8
AK096210 BAG53231 Q9Y276
BX571752 CAE11877 Q9Y276

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCS1L NP_001073335 R.norvegicus Bcs1l 301514   NP_001007667 95
M.musculus Bcs1l 66821 Gene Info NP_080060 94
A.gambiae AgaP_AGAP004266 1274111   XP_313188 63
D.melanogaster CG4908 34360   NP_609358 61
S.cerevisiae BCS1 851981   NP_010663 51
C.elegans bcs-1 174372   NP_001022191 50
S.pombe SPAC644.07 2543663   NP_593875 47
P.falciparum PFF0155w 3885965   XP_966022 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)