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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAPH1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
Sequence ID:NM_025252
NM_203365
NM_213589
Entrez Gene ID:65059
Ensembl ID:ENSG00000173166

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 204302757 - 204360034

 Exon Info From UCSC:
NM_203365
NM_213589

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063636Full LengthBC156922Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
100061596BC156182Ras association (RalGDS/AF-6) and pleckstrin homology domains 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_976241  NP_998754  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_203365 NP_976241   PH
RA
NM_213589 NP_998754 Q70E73 PH
RA

Related Sequences

 
mRNAGenPeptSwissProt
BC156182 AAI56183 Q70E73
BC156922 AAI56923  
AY523977 AAS16935 Q70E73
AY523978 AAS16936 Q70E73
AY494951 AAS82582 Q70E73
AB051468 BAB21772 Q70E73
AB053311 BAB69020 Q70E73
AK096270 BAC04744 Q8N8R9
AJ584699 CAE48361 Q70E73

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAPH1 NP_998754 A.gambiae AgaP_AGAP002695 1273266   XP_312227 34
C.elegans mig-10 176168   NP_001021248 34
D.melanogaster pico 33003   NP_001188674 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)