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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TLN1, talin 1
Sequence ID:NM_006289
Entrez Gene ID:7094
Ensembl ID:ENSG00000137076

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 35697337 - 35732367

 Exon Info From UCSC:
NM_006289

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5576203Full LengthBC042923talin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006280  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006289 NP_006280 Q9Y490 Band_41
I_LWEQ

Related Sequences

 
mRNAGenPeptSwissProt
AF078828 AAD13152 Q9Y490
AF177198 AAF23322 Q9Y490
AF113217 AAG39288 Q9H3E8
BC042923 AAH42923 Q9Y490
AB028950 BAA82979 Q9Y490

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TLN1 NP_006280 R.norvegicus Tln1 313494   NP_001034114 99
M.musculus Tln1 21894 Gene Info NP_035732 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta