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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. POLR2I, polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
Sequence ID:NM_006233
Entrez Gene ID:5438
Ensembl ID:ENSG00000105258

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 36605263 - 36606048

NM_006233 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
151223660461136604718
1231743660491636604967
1752493660507836605152
2503233660524036605313
3243783660556036605614
3798853660569936606205

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3608402Full LengthBC017112polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
5285070Full LengthBC067794polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006224  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006233 NP_006224 P36954 RNA_POL_M_15KD

Related Sequences

 
mRNAGenPeptSwissProt
BC017112 AAH17112 P36954
BC067794 AAH67794 P36954
DQ893214 ABM84140  
DQ896543 ABM87542  
AK312206 BAG35139 P36954

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POLR2I NP_006224 M.musculus Polr2i 69920 Gene Info NP_081535 100
R.norvegicus Polr2i 292778   NP_001099714 100
A.gambiae AgaP_AGAP008393 1277585   XP_317057 78
D.melanogaster RpII15 41741   NP_731898 78
A.thaliana NRPB9A 820954   NP_188323 64
A.thaliana NRPB9B 827321   NP_567490 62
C.elegans rpb-9 179178   NP_505062 62
S.pombe rpb9 2541470   NP_594705 50
S.cerevisiae RPB9 852810   NP_011445 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)