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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC25A12, solute carrier family 25 (aspartate/glutamate carrier), member 12
Sequence ID:NM_003705
NR_047549
RefSeqGene ID:NG_011781
Entrez Gene ID:8604
Ensembl ID:ENSG00000115840

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
HYPOMYELINATION, GLOBAL CEREBRAL 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 172640879 - 172750745

 Exon Info From UCSC:
NM_003705

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4420100Full LengthBC016932solute carrier family 25 (mitochondrial carrier, Aralar), member 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003696  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003705 NP_003696 O75746 efhand
Mito_carr

Related Sequences

 
mRNAGenPeptSwissProt
BC016932 AAH16932 O75746
DQ891540 ABM82466  
EU176607 ABW03408  
AK022828 BAG51120 B3KMV8
AK091071 BAG52276 B3KR64
AK294638 BAG57817 B4DGK6
Y14494 CAA74834 O75746
AJ496568 CAD43090 O75746

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC25A12 NP_003696 M.musculus Slc25a12 78830 Gene Info NP_766024 97
A.gambiae AgaP_AGAP000958 1270452   XP_309148 61
D.melanogaster aralar1 43616   NP_733364 60
C.elegans K02F3.2 175242   NP_497274 56
N.crassa NCU01241 3877755   XP_961607 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)