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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ITGB6, integrin, beta 6
Sequence ID:NM_000888
Entrez Gene ID:3694
Ensembl ID:ENSG00000115221

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 160956181 - 160958258

 Exon Info From UCSC:
NM_000888

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40122759Full LengthBC121178integrin, beta 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000879  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000888 NP_000879 P18564 Integrin_beta
Integrin_B_tail
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
M35198 AAA36122 P18564
BC121178 AAI21179 P18564
AK290300 BAF82989 A8K2N5
AK313944 BAG36662 P18564
AK304203 BAG65080 B4E2B8
AM393800 CAL38675  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITGB6 NP_000879 M.musculus Itgb6 16420 Gene Info NP_067334 91
R.norvegicus Itgb6 311061   NP_001004263 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)