Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARL5A, ADP-ribosylation factor-like 5A
Sequence ID:NM_001037174
NM_012097
NM_177985
Entrez Gene ID:26225
Ensembl ID:ENSG00000162980

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone marrow, brain, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 152659128 - 152684755

 Exon Info From UCSC:
NM_001037174
NM_012097
NM_177985

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3453177Full LengthBC001254ADP-ribosylation factor-like 5A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_817114  NP_036229  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037174 NP_001032251    
NM_012097 NP_036229 Q9Y689 Arf
NM_177985 NP_817114   Arf
MMR_HSR1
Miro

Related Sequences

 
mRNAGenPeptSwissProt
AF100740 AAD40383 Q9Y689
BC001254 AAH01254 Q9Y689
AF493891 AAM12605 Q9Y689
BT009829 AAP88831 Q9Y689
AF087889 AAP97188 Q9Y689
DQ891193 ABM82119  
DQ894376 ABM85302  
AK292714 BAF85403 Q9Y689
AK298937 BAG61039 B4DQS7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARL5A NP_036229 M.musculus Arl5a 75423 Gene Info NP_892039 99
R.norvegicus Arl5a 117050   NP_446431 99
A.gambiae AgaP_AGAP011254 1270671   XP_309388 74
D.melanogaster CG7197 38931   NP_648201 73
A.thaliana ARFC1 821868   NP_001189951 57
C.elegans arl-5 176392   NP_499178 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)