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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLASP1, cytoplasmic linker associated protein 1
Sequence ID:NM_001142273
NM_001142274
NM_001207051
NM_015282
Entrez Gene ID:23332
Ensembl ID:ENSG00000074054

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q14.2-q14.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 122095354 - 122227501

 Exon Info From UCSC:
NM_001142273
NM_001142274
NM_015282

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5501463Full LengthBC112940cytoplasmic linker associated protein 1
9052627Full LengthBC144107cytoplasmic linker associated protein 1
40146745Full LengthBC132723cytoplasmic linker associated protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056097  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142273 NP_001135745    
NM_001142274 NP_001135746    
NM_001207051 NP_001193980    
NM_015282 NP_056097 Q7Z460 HEAT

Related Sequences

 
mRNAGenPeptSwissProt
BC032563 AAH32563 Q7Z460
BC112940 AAI12941 Q7Z460
BC132723 AAI32724 A2RU21
BC144107 AAI44108 B7ZLX3
AF347693 AAQ15051 Q7Z460
AY425956 AAR07949 Q6TAR3
AB014522 BAA31597 Q7Z460
AK294922 BAH11926 B7Z2P0
AK297259 BAH12531 B7Z4E5
AK297420 BAH12576 B7Z4J0
AK299331 BAH13003 B7Z5R7
AK301814 BAH13560 B7Z7C4
AK302393 BAH13694 B7Z7Q8
AJ288057 CAC35156 Q7Z460
CR749627 CAH18421 Q68D09
CR933722 CAI46251 Q7Z460

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLASP1 NP_001135745 M.musculus Clasp1 76707 Gene Info NP_001074745 98
R.norvegicus Clasp1 304740   XP_002728040 87
A.gambiae AgaP_AGAP007623 1269605   XP_308248 36
D.melanogaster chb 43901   NP_524651 35
C.elegans ZC84.3 176298   NP_499034 32
C.elegans cls-2 176280   NP_499005 29
C.elegans C07H6.3 176064   NP_498649 27
A.thaliana CLASP 816539   NP_849997 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)