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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RCC1, Regulator of chromosome condensation 1
Sequence ID:NM_001048199
NM_001048194
NM_001048195
NM_001269
Entrez Gene ID:1104
Ensembl ID:ENSG00000180198

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 28836976 - 28837404

 Exon Info From UCSC:
NM_001048199
NM_001048194
NM_001048195
NM_001269

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4122227Full LengthBC010067regulator of chromosome condensation 1
6586198Full LengthBC069198regulator of chromosome condensation 1
2901247IncompleteBC006790regulator of chromosome condensation 1
4646567IncompleteBC017334regulator of chromosome condensation 1
4648999IncompleteBC012122regulator of chromosome condensation 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001260  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001048194 NP_001041659    
NM_001048195 NP_001041660    
NM_001048199 NP_001041664    
NM_001269 NP_001260 Q5T081
P18754
RCC1

Related Sequences

 
mRNAGenPeptSwissProt
S75708 AAB32653 P18754
BC010067 AAH10067 Q5T081
P18754
BC069198 AAH69198 P18754
AF498924 AAM21072 Q5T081
P18754
DQ893153 ABM84079  
DQ896760 ABM87759  
X12654 CAA31182 Q5T081
P18754
CR407693 CAG28621 Q5T081
P18754

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RCC1 NP_001260 M.musculus Rcc1 100088 Gene Info NP_598639 94
A.gambiae AgaP_AGAP003742 1271474   XP_310274 45
D.melanogaster Bj1 38669   NP_523943 45
C.elegans ran-3 174332   NP_495753 37
S.pombe pim1 2541059   NP_596026 37
N.crassa NCU05513 3876597   XP_960475 34
S.cerevisiae SRM1 852782   NP_011418 33
P.falciparum MAL7P1.38 2655211   XP_001349028 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta