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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IL18R1, interleukin 18 receptor 1
Sequence ID:NM_003855
Entrez Gene ID:8809
Ensembl ID:ENSG00000115604

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 102927988 - 103013346

NM_003855 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
182102979096102979177
83326102984284102984527
327492102988412102988577
493649102992366102992522
650712102998079102998141
713833103001337103001457
834973103003320103003459
9741135103006515103006676
11361294103010928103011086
12953519103012990103015214

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262302Full LengthBC069575interleukin 18 receptor 1
7939820Full LengthBC093975interleukin 18 receptor 1
7939822Full LengthBC093977interleukin 18 receptor 1
9051910Full LengthBC143403interleukin 18 receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003846  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003855 NP_003846 Q13478 TIR

Related Sequences

 
mRNAGenPeptSwissProt
U43672 AAC50390 Q13478
BC069575 AAH69575 Q13478
BC093975 AAH93975 Q13478
BC093977 AAH93977 Q13478
BC143403 AAI43404 B7ZKV7
AY192162 AAO41718 Q86YL8
AK313967 BAG36682 Q13478

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IL18R1 NP_003846 R.norvegicus Il18r1 301365   NP_001100375 66
M.musculus Il18r1 16182 Gene Info NP_032391 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta