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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL31, ribosomal protein L31
Sequence ID:NM_000993
NM_001098577
NM_001099693
Entrez Gene ID:6160
Ensembl ID:ENSG00000071082

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 101619163 - 101620644

 Exon Info From UCSC:
NM_000993
NM_001098577
NM_001099693

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4666695Full LengthBC070373ribosomal protein L31
4714258Full LengthBC070210ribosomal protein L31
4895396Full LengthBC017343ribosomal protein L31
2823904IncompleteBC001663ribosomal protein L31

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000984  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000993 NP_000984 P62899 Ribosomal_L31e
NM_001098577 NP_001092047    
NM_001099693 NP_001093163    

Related Sequences

 
mRNAGenPeptSwissProt
BC017343 AAH17343 P62899
BC070210 AAH70210 P62899
BC070373 AAH70373 P62899
DQ892609 ABM83535  
DQ895849 ABM86775  
D28386 BAA05752  
AK311775 BAG34718 B2R4C1
AK297483 BAH12588 P62899
X15940 CAA34066 P62899
X69181 CAA48925 P62899

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL31 NP_000984 M.musculus Gm10191 100042740 Gene Info XP_001479218 100
M.musculus Rpl31 114641 Gene Info NP_444487 100
M.musculus Gm8759 667682 Gene Info XP_996947 100
R.norvegicus LOC100361974 100361974   XP_002727988 98
A.gambiae AgaP_AGAP011896 1280764   XP_320630 75
D.melanogaster RpL31 35988   NP_610503 74
C.elegans rpl-31 173235   NP_493391 71
N.crassa NCU08344 3881387   XP_965247 61
S.pombe rpl31 2543475   NP_594826 60
A.thaliana AT4G26230 828729   NP_194353 59
A.thaliana AT2G19740 816493   NP_179564 59
S.cerevisiae RPL31A 851484   NP_010208 59
S.cerevisiae RPL31B 851122   NP_013510 59
A.thaliana AT5G56710 835772   NP_200482 58
P.falciparum PFE0185c 812922   XP_001351596 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)