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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDCL3, Phosducin-like 3
Sequence ID:NM_024065
Entrez Gene ID:79031
Ensembl ID:ENSG00000115539

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 101179477 - 101193194

NM_024065 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1118101179417101179534
119245101182964101183090
246336101185392101185482
337480101186039101186182
481689101188051101188259
6901075101192815101193200

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3344703Full LengthBC001021phosducin-like 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024065 NP_076970 Q9H2J4  

Related Sequences

 
mRNAGenPeptSwissProt
AF110511 AAG21887 Q9H2J4
AF267853 AAG44722 Q9H2J4
BC001021 AAH01021 Q9H2J4
HQ448695 ADQ33173  
AK313985 BAG36697 Q9H2J4
AK300827 BAH13356 B7Z6S0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDCL3 NP_076970 M.musculus Pdcl3 68833 Gene Info NP_081126 90
R.norvegicus Pdcl3 316348   NP_001020880 90
A.gambiae AgaP_AGAP010477 1272560   XP_311467 54
D.melanogaster viaf 39364   NP_524032 53
A.thaliana AT5G14240 831274   NP_196928 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)