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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC9A1, solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
Sequence ID:NM_003047
NR_046474
RefSeqGene ID:NG_030006
Entrez Gene ID:6548
Ensembl ID:ENSG00000090020

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.1-p35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 27426750 - 27480868

 Exon Info From UCSC:
NM_003047

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4652523Full LengthBC012121solute carrier family 9 (sodium/hydrogen exchanger), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003038  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003047 NP_003038 P19634 Na_H_Exchanger

Related Sequences

 
mRNAGenPeptSwissProt
M81768 AAB59460 P19634
S68616 AAC60606 P19634
AF141350 AAF21350 P19634
AF141351 AAF21351 P19634
AF141352 AAF21352 P19634
AF141353 AAF21353 P19634
AF141354 AAF21354 P19634
AF141355 AAF21355 P19634
AF141356 AAF21356 P19634
AF141357 AAF21357 P19634
AF141358 AAF21358 P19634
AF141359 AAF21359 P19634
AF146430 AAF25592 P19634
AF146431 AAF25593 P19634
AF146432 AAF25594 P19634
AF146433 AAF25595 P19634
AF146434 AAF25596 P19634
AF146435 AAF25597 P19634
AF146436 AAF25598 P19634
AF146437 AAF25599 P19634
AF146438 AAF25600 P19634
AF146439 AAF25601 P19634
BC012121 AAH12121 P19634
JF432248 ADZ15465  
AK314190 BAG36869 B2RAH2
AK300432 BAG62158 B4DTZ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC9A1 NP_003038 R.norvegicus Slc9a1 24782   NP_036784 94
M.musculus Slc9a1 20544 Gene Info NP_058677 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)