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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TTC27, Tetratricopeptide repeat domain 27
Sequence ID:NM_017735
NM_001193509
Entrez Gene ID:55622
Ensembl ID:ENSG00000018699

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 32865459 - 33046118

 Exon Info From UCSC:
NM_017735
NM_001193509

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6500951Full LengthBC063791tetratricopeptide repeat domain 27
3457160IncompleteBC001248tetratricopeptide repeat domain 27

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060205  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193509 NP_001180438    
NM_017735 NP_060205 Q6P3X3 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
BC001248 AAH01248 Q6P3X3
BC063791 AAH63791 Q6P3X3
AK000279 BAA91048 Q6P3X3
AK000665 BAA91315 Q6P3X3
AK027570 BAB55206 Q6P3X3
AK299196 BAG61239 B4DRC7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TTC27 NP_060205 R.norvegicus Ttc27 298782   NP_001100176 86
M.musculus Ttc27 74196 Gene Info NP_690030 85
C.elegans T20B12.1 176055   NP_498636 36
S.pombe SPAC19B12.01 2543591   NP_594764 33
D.melanogaster CG5290 39998   NP_649026 32
A.gambiae AgaP_AGAP006358 1276965   XP_316379 31
N.crassa NCU09658 3874862   XP_958724 30
S.cerevisiae EMW1 855403   NP_014086 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)