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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDC42, cell division cycle 42 (GTP binding protein, 25kDa)
Sequence ID:NM_001039802
NM_001791
NM_044472
Entrez Gene ID:998
Ensembl ID:ENSG00000070831

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 22404971 - 22416525

 Exon Info From UCSC:
NM_001039802
NM_001791
NM_044472

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3449526Full LengthBC018266cell division cycle 42 (GTP binding protein, 25kDa)
3457085Full LengthBC003682cell division cycle 42 (GTP binding protein, 25kDa)
3626647Full LengthBC002711cell division cycle 42 (GTP binding protein, 25kDa)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_426359  NP_001782  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039802 NP_001034891    
NM_001791 NP_001782   Ras
Miro
NM_044472 NP_426359 P60953 Ras

Related Sequences

 
mRNAGenPeptSwissProt
M35543 AAA52494 P60953
M57298 AAA52592 P60953
BC002711 AAH02711 P60953
BC003682 AAH03682 P60953
BC018266 AAH18266 P60953
AF498962 AAM21109 P60953
AF498963 AAM21110 P60953
DQ891195 ABM82121  
DQ894377 ABM85303  
AK297465 BAG59887 B4DMH5
AK303994 BAG64911 B4E1U9
AK316449 BAH14820 B7ZAY4
AL121734 CAB57325 P60953
AL121735 CAB57326 P60953
AL121736 CAB57327 Q9UJM1
AL121737 CAB57328 Q9UJM0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDC42 NP_001034891 M.musculus Cdc42 12540 Gene Info NP_033991 100
R.norvegicus Cdc42 64465   NP_741991 100
S.pombe cdc42 2543027   NP_593536 82
S.cerevisiae CDC42 850930   NP_013330 80
N.crassa NCU06454 3873514   XP_957345 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta