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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCNJ13, potassium inwardly-rectifying channel, subfamily J, member 13
Sequence ID:NM_001172416
NM_001172417
NM_002242
RefSeqGene ID:NG_016742
Entrez Gene ID:3769
Ensembl ID:ENSG00000115474

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LEBER CONGENITALAMAUROSIS 16 
SNOWFLAKE VITREORETINAL DEGENERATION 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 233632850 - 233641226

 Exon Info From UCSC:
NM_001172416
NM_001172417
NM_002242

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4817527Full LengthBC037290potassium inwardly-rectifying channel, subfamily J, member 13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002233  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172416 NP_001165887    
NM_001172417 NP_001165888    
NM_002242 NP_002233 O60928 IRK

Related Sequences

 
mRNAGenPeptSwissProt
AF061118 AAC15769 O60928
BC037290 AAH37290 O60928
AY758240 AAX08098 O60928
AY758241 AAX08099 O60928
DQ891724 ABM82650  
DQ894901 ABM85827  
AK314019 BAG36730 O60928
AJ006128 CAA06878 O60928
AJ007557 CAA07552 O60928

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNJ13 NP_002233 R.norvegicus Kcnj13 94341   NP_446060 94
M.musculus Kcnj13 100040591 Gene Info NP_001103697 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)