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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCNC3, potassium voltage-gated channel, Shaw-related subfamily, member 3
Sequence ID:NM_004977
RefSeqGene ID:NG_008134
Entrez Gene ID:3748
Ensembl ID:ENSG00000131398

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
SPINOCEREBELLAR ATAXIA 13 

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 50815198 - 50827310

NM_004977 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15845081876450819347
5857115082347950823605
7129035082384950824040
90420115082623150827338
201231765083146950832633

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100061753BC156302potassium voltage-gated channel, Shaw-related subfamily, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004968  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004977 NP_004968 Q14003 Ion_trans
K_tetra
Ion_trans_2

Related Sequences

 
mRNAGenPeptSwissProt
AF055989 AAC24118 Q14003
BC156302 AAI56303  
AK127492 BAC87004 Q6ZSE9
AB208930 BAD92167 Q59H29

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNC3 NP_004968 M.musculus Kcnc3 16504 Gene Info NP_032448 96
R.norvegicus Kcnc3 117101   NP_446449 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)