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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRKD2, protein kinase D2
Sequence ID:NM_001079880
NM_001079881
NM_001079882
NM_016457
Entrez Gene ID:25865
Ensembl ID:ENSG00000105287

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 47177578 - 47193948

 Exon Info From UCSC:
NM_001079880
NM_001079881
NM_001079882
NM_016457

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063558Full LengthBC156946protein kinase D2
3846894IncompleteBC015472protein kinase D2
4127433IncompleteBC025307protein kinase D2
100062380BC156073protein kinase D2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057541  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001079880 NP_001073349      
NM_001079881 NP_001073350      
NM_001079882 NP_001073351      
NM_016457 NP_057541 Q9BZL6 EC 2.7.11.13 Pkinase
C1_1
PH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151021 AAF36107 Q9BZL6 EC 2.7.11.13
BC015472 AAH15472 A0JLT6  
BC156073 AAI56074    
BC156946 AAI56947    
AF309082 AAK01149 Q9BZL6 EC 2.7.11.13
AK074673 BAC11127 Q8NCK8  
AK075266 BAC11508 Q8N2H2  
AK095884 BAG53158 Q8NCK8  
AK300339 BAG62084 B4DTS2  
AK303629 BAG64637 B4E125  
AL050147 CAB43292 Q9BZL6 EC 2.7.11.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRKD2 NP_001073349 M.musculus Prkd2 101540 Gene Info NP_849231 96
R.norvegicus Prkd2 292658   NP_001013917 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)