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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPATCH1, G patch domain containing 1
Sequence ID:NM_018025
Entrez Gene ID:55094
Ensembl ID:ENSG00000076650

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 33572099 - 33621313

 Exon Info From UCSC:
NM_018025

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3029084Full LengthBC006108G patch domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060495  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018025 NP_060495 Q9BRR8 DUF1604

Related Sequences

 
mRNAGenPeptSwissProt
BC006108 AAH06108 Q9BRR8
AF434677 AAN63596 Q9BRR8
AK001068 BAA91489 Q9BRR8
AK292503 BAF85192 A8K8Y8
AK315712 BAG38071 B2RDX4
AL834465 CAD39124 Q9BRR8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPATCH1 NP_060495 M.musculus Gpatch1 67471 Gene Info NP_080457 85
R.norvegicus Gpatch1 292810   NP_001099716 84
A.gambiae AgaP_AGAP011880 1280778   XP_320644 36
D.melanogaster CG8833 39535   NP_648669 36
C.elegans R07E5.1 175574   NP_497893 35
A.thaliana TGH 832372   NP_197699 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)