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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PLEKHF1, pleckstrin homology domain containing, family F (with FYVE domain) member 1
Sequence ID:NM_024310
Entrez Gene ID:79156
Ensembl ID:ENSG00000166289

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 30164746 - 30165586

NM_024310 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1863015632630156411
8717323016473030166375

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3628796Full LengthBC002744pleckstrin homology domain containing, family F (with FYVE domain) member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077286  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024310 NP_077286 Q96S99 PH
FYVE

Related Sequences

 
mRNAGenPeptSwissProt
BC002744 AAH02744 Q96S99
AY037145 AAK67626 Q96S99
AF434818 AAL30773 Q96S99
AK027758 BAB55349 Q96S99
AK301616 BAG63101 B4DWN9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PLEKHF1 NP_077286 R.norvegicus Plekhf1 308543   NP_001013166 91
M.musculus Plekhf1 72287 Gene Info NP_077724 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)