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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ILF3, Interleukin enhancer binding factor 3, 90kDa
Sequence ID:NM_017620
NM_012218
NM_001137673
NM_004516
NM_153464
RefSeqGene ID:NG_029220
Entrez Gene ID:3609
Ensembl ID:ENSG00000129351

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10794125 - 10796441

 Exon Info From UCSC:
NM_017620
NM_012218
NM_001137673
NM_004516
NM_153464

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6503234Full LengthBC064836interleukin enhancer binding factor 3, 90kDa
3355126IncompleteBC001770interleukin enhancer binding factor 3, 90kDa
3502777IncompleteBC003086interleukin enhancer binding factor 3, 90kDa
3623502IncompleteBC018633interleukin enhancer binding factor 3, 90kDa
3941313IncompleteBC014221interleukin enhancer binding factor 3, 90kDa
4417017IncompleteBC048314interleukin enhancer binding factor 3, 90kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036350  NP_004507  NP_703194  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001137673 NP_001131145    
NM_004516 NP_004507   dsrm
DZF
NM_012218 NP_036350 Q12906 dsrm
DZF
NM_017620 NP_060090    
NM_153464 NP_703194   dsrm
DZF

Related Sequences

 
mRNAGenPeptSwissProt
U10324 AAA20994 Q12906
AF007140 AAC19152 Q12906
AF147209 AAD33966 Q12906
AF141870 AAD37575 Q12906
AF167569 AAD51098 Q12906
AF167570 AAD51099 Q12906
BC048314 AAH48314 Q12906
BC064836 AAH64836 Q12906
AY240961 AAP68989  
HQ322263 AEE02018 F4ZW64
HQ322264 AEE02019 F4ZW65
HQ322265 AEE02020 F4ZW66
AK000018 BAA90887 Q9NXX0
AK025821 BAB15245 Q9NXX0
AB209062 BAD92299 Q59GP7
AK291205 BAF83894 A8K590
AK291617 BAF84306 Q12906
AK293170 BAG56714 B4DDF3
AK294084 BAG57425 B4DFG4
X98264 CAA66917 Q12906
X98265 CAA66918 Q12906
AJ271744 CAC01404 Q12906
AJ271745 CAC01405 Q12906
AJ271746 CAC01406 Q12906
CR457223 CAG33504 Q9NXX0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ILF3 NP_060090 R.norvegicus Ilf3 84472   NP_445864 94
M.musculus Ilf3 16201 Gene Info NP_034691 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)