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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HNRNPM, heterogeneous nuclear ribonucleoprotein M
Sequence ID:NM_005968
NM_031203
RefSeqGene ID:NG_029850
Entrez Gene ID:4670
Ensembl ID:ENSG00000099783

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3-p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 8509883 - 8553994

 Exon Info From UCSC:
NM_005968
NM_031203

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2900532Full LengthBC000138heterogeneous nuclear ribonucleoprotein M
4938259Full LengthBC019580heterogeneous nuclear ribonucleoprotein M
3678884IncompleteBC008895heterogeneous nuclear ribonucleoprotein M
4829644IncompleteBC045573heterogeneous nuclear ribonucleoprotein M
5269542IncompleteBC038753heterogeneous nuclear ribonucleoprotein M
5740504IncompleteBC064588heterogeneous nuclear ribonucleoprotein M

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112480  NP_005959  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005968 NP_005959 P52272 RRM_1
NM_031203 NP_112480   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
L03532 AAA36192 P52272
AF061832 AAC16002 P52272
BC000138 AAH00138 P52272
BC008895 AAH08895 P52272
BC019580 AAH19580 P52272
BC064588 AAH64588 Q6P2D7
L32611 AAL31359 P52272
AB209733 BAD92970 Q59ES8
X72018 CAA50897 Q7KYM9
AL713781 CAD28541 Q8TCM5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HNRNPM NP_005959 M.musculus Hnrnpm 76936 Gene Info NP_084080 98
R.norvegicus Hnrnpm 116655   NP_001103381 98
D.melanogaster rump 41138   NP_649899 40
A.gambiae AgaP_AGAP001460 1281715   XP_551368 37
P.falciparum PF10_0068 810226   XP_001347353 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)