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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SEMA6B, Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
Sequence ID:NM_032108
Entrez Gene ID:10501
Ensembl ID:ENSG00000167680

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 4542795 - 4558503

 Exon Info From UCSC:
NM_032108

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40147342Full LengthBC142617sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115484  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032108 NP_115484 Q9H3T3 Sema
PSI

Related Sequences

 
mRNAGenPeptSwissProt
AF216389 AAF87661 Q9H3T3
BC142617 AAI42618 Q9H3T3
AF293363 AAK16831 Q9BXR8
AY358939 AAQ89298 Q9H3T3
AB022433 BAB20669 Q9H3T3
AB209278 BAD92515 Q59G31
AK300037 BAG61848 B4DT36
FR839673 CCA61013 F6IB19

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEMA6B NP_115484 M.musculus Sema6b 20359 Gene Info NP_038690 90
R.norvegicus Sema6b 84609   NP_445923 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)