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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HMHA1, histocompatibility (minor) HA-1
Sequence ID:NM_001258328
NM_012292
NR_047652
Entrez Gene ID:23526
Ensembl ID:ENSG00000180448

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 1077441 - 1086627


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5751491Full LengthBC065223histocompatibility (minor) HA-1
5139641IncompleteBC035564histocompatibility (minor) HA-1
5273411IncompleteBC048129histocompatibility (minor) HA-1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036424  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001258328 NP_001245257    
NM_012292 NP_036424 Q92619 C1_1
RhoGAP

Related Sequences

 
mRNAGenPeptSwissProt
BC035564 AAH35564 Q8IYN3
BC048129 AAH48129 Q92619
BC065223 AAH65223 Q92619
D86976 BAA13212 Q92619
AK122776 BAG53721 B3KVA9
AK128097 BAG54629 B3KXW7
AK300341 BAG62086 B4DTS4
AK304765 BAG65520 B4E3K8
AK304271 BAH14146 B7Z910

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HMHA1 NP_036424 M.musculus Hmha1 70719 Gene Info NP_001136173 84
R.norvegicus Hmha1 314618   NP_001101537 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)