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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LMAN1, lectin, mannose-binding, 1
Sequence ID:NM_005570
RefSeqGene ID:NG_012097
Entrez Gene ID:3998
Ensembl ID:ENSG00000074695

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
COMBINED FACTOR V AND VIII DEFICIENCYMCFD2

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q21.3-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 56995055 - 56997201

 Exon Info From UCSC:
NM_005570

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5167524Full LengthBC032330lectin, mannose-binding, 1
4277970IncompleteBC017858lectin, mannose-binding, 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005561  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005570 NP_005561 P49257 Lectin_leg-like

Related Sequences

 
mRNAGenPeptSwissProt
U09716 AAA95960 P49257
BC017858 AAH17858 A0PJ85
BC032330 AAH32330 P49257
DQ891254 ABM82180  
DQ894440 ABM85366  
AK223208 BAD96928 Q53FS4
AK312869 BAG35721 B2R774
AK301244 BAG62812 B4DVV0
X71661 CAA50653 P49257

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LMAN1 NP_005561 M.musculus Lman1 70361 Gene Info NP_001165533 89
R.norvegicus Lman1 116666   NP_446338 89
A.gambiae AgaP_AGAP005404 1276104   XP_315413 46
D.melanogaster ergic53 44679   NP_524776 43
C.elegans ile-1 172799   NP_492548 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)