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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PSMA8, Proteasome (prosome, macropain) subunit, alpha type, 8
Sequence ID:NM_144662
NM_001025096
NM_001025097
Entrez Gene ID:143471
Ensembl ID:ENSG00000154611

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 23713882 - 23773319

 Exon Info From UCSC:
NM_144662
NM_001025096
NM_001025097

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4826048Full LengthBC021713proteasome (prosome, macropain) subunit, alpha type, 8
4828792Full LengthBC028371proteasome (prosome, macropain) subunit, alpha type, 8
4828931Full LengthBC028686proteasome (prosome, macropain) subunit, alpha type, 8
5268996Full LengthBC042820proteasome (prosome, macropain) subunit, alpha type, 8
4827373IncompleteBC025393proteasome (prosome, macropain) subunit, alpha type, 8
4829939IncompleteBC025389proteasome (prosome, macropain) subunit, alpha type, 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020268  NP_653263  NP_001020267  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001025096 NP_001020267     Proteasome
NM_001025097 NP_001020268     Proteasome
NM_144662 NP_653263 Q8TAA3 EC 3.4.25.1 Proteasome

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC021713 AAH21713 Q4G1B8  
BC028371 AAH28371 Q8TAA3 EC 3.4.25.1
BC028686 AAH28686 Q8TAA3 EC 3.4.25.1
BC042820 AAH42820 Q8TAA3 EC 3.4.25.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMA8 NP_653263 R.norvegicus RGD1311659 364814   NP_001102354 96
M.musculus Psma8 73677 Gene Info NP_001157081 95
A.gambiae AgaP_AGAP005423 1276122   XP_315431 73
D.melanogaster Pros28.1 32584   NP_525092 71
A.thaliana PAD1 824289   NP_190694 68
A.thaliana PAD2 836746   NP_201415 67
N.crassa NCU06440 3873500   XP_957331 64
C.elegans pas-4 172679   NP_492360 61
S.pombe pre6 2540175   NP_595165 56
S.cerevisiae PRE6 854119   NP_014604 56
P.falciparum MAL13P1.270 813832   XP_001350251 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)