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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C18orf8, chromosome 18 open reading frame 8
Sequence ID:NM_013326
Entrez Gene ID:29919
Ensembl ID:ENSG00000141452

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 21084336 - 21111737

 Exon Info From UCSC:
NM_013326

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3537084Full LengthBC008305chromosome 18 open reading frame 8
3538017Full LengthBC002950chromosome 18 open reading frame 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037458  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000271 NP_000262 O15118 Patched
NM_013326 NP_037458 Q96DM3 Mic1

Related Sequences

 
mRNAGenPeptSwissProt
AF002020 AAB63982 O15118
AF143536 AAD33909 Q96DM3
BC002950 AAH02950 Q96DM3
BC008305 AAH08305 Q96DM3
BC063302 AAH63302 O15118
AK057192 BAB71377 Q96DM3
AB209048 BAD92285 Q59GR1
AK293779 BAG57194 B4DET3
AK295715 BAG58559 B4DIP7
AK294169 BAH11687 B7Z201
AK295246 BAH12017 B7Z2Y1
AK296230 BAH12287 B7Z3Q1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C18orf8 NP_037458 M.musculus 3110002H16Rik 76482 Gene Info NP_083899 95
R.norvegicus RGD1311805 291784   NP_001009638 95
A.gambiae AgaP_AGAP007576 1269653   XP_564671 42
D.melanogaster CG8270 38734   NP_648047 38
C.elegans Y50D4A.4 178616   NP_503392 32
A.thaliana AT3G12010 820375   NP_187808 27