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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TBCD, Tubulin folding cofactor D
Sequence ID:NM_005993
RefSeqGene ID:NG_011721
Entrez Gene ID:6904
Ensembl ID:ENSG00000141556

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 80709960 - 80900578

 Exon Info From UCSC:
NM_005993

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3503192Full LengthBC003094tubulin folding cofactor D
4131114Full LengthBC006364tubulin folding cofactor D
4865367Full LengthBC039654tubulin folding cofactor D
2961209IncompleteBC012824tubulin folding cofactor D

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005993 NP_005984 Q9BTW9  
NM_024702 NP_078978 Q32MQ0  

Related Sequences

 
mRNAGenPeptSwissProt
AF193042 AAG22470 Q9BTW9
BC003094 AAH03094 Q9BTW9
BC006364 AAH06364 I6L959
BC012824 AAH12824 Q9BTW9
BC039654 AAH39654 Q9BTW9
BC109036 AAI09037 Q32MQ0
BC109037 AAI09038 Q32MQ0
DQ891885 ABM82811  
EU176650 ABW03451  
AB023205 BAA76832 Q9BTW9
AK023903 BAB14718 Q32MQ0
AK091959 BAC03777 Q9BTW9
AK129619 BAC85197 Q6ZPB7
AK293471 BAG56964 B4DE53
AK301690 BAG63162 B4DWV0
AJ006417 CAA07022 Q9BTW9
AL096745 CAB62532 Q9BTW9
AL133562 CAB63716 Q9BTW9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBCD NP_005984 M.musculus Tbcd 108903 Gene Info NP_084154 82
R.norvegicus LOC100361417 100361417   XP_002730121 79
A.gambiae AgaP_AGAP004782 1278442   XP_318031 42
D.melanogaster CG7261 33389   NP_608648 42
A.thaliana TTN1 825245   NP_191633 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)