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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NPLOC4, nuclear protein localization 4 homolog (S. cerevisiae)
Sequence ID:NM_017921
Entrez Gene ID:55666
Ensembl ID:ENSG00000182446

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17qter

Chromosomal Position (from UCSC)

Chromosomal Position:17: 79528791 - 79604086

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5017718Full LengthBC025930nuclear protein localization 4 homolog (S. cerevisiae)
2967712IncompleteBC013406nuclear protein localization 4 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060391  

Protein Infomation

NM_017921 NP_060391 Q8TAT6 zf-NPL4

Related Sequences

BC025930 AAH25930 Q8TAT6
DQ895356 ABM86282  
AK000664 BAA91314 Q8TAT6
AB040932 BAA96023 Q8TAT6
AK023046 BAB14372 Q8TAT6
AK023272 BAB14499 Q8TAT6
AK294473 BAG57700 B4DG89
AL834300 CAD38971 Q8TAT6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens NPLOC4 NP_060391 M.musculus Nploc4 217365 Gene Info NP_955763 97
R.norvegicus Nploc4 140639   NP_542144 97
A.gambiae AgaP_AGAP001986 3290541   XP_550827 51
D.melanogaster CG4673 43091   NP_001163731 51
C.elegans npl-4.1 173952   NP_495096 46
C.elegans npl-4.2 3565577   NP_495093 46
S.pombe npl4 2539821   NP_595883 38
N.crassa NCU02680 3881619   XP_965453 37
S.cerevisiae NPL4 852468   NP_009729 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)