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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FTSJ3, FtsJ homolog 3 (E. coli)
Sequence ID:NM_017647
Entrez Gene ID:117246
Ensembl ID:ENSG00000108592

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 61896792 - 61897356

 Exon Info From UCSC:
NM_017647

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4641078Full LengthBC036710FtsJ homolog 3 (E. coli)
3445488IncompleteBC000131FtsJ homolog 3 (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060117  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017647 NP_060117 Q8IY81 FtsJ
Spb1_C

Related Sequences

 
mRNAGenPeptSwissProt
BC000131 AAH00131 Q8IY81
BC036710 AAH36710 Q8IY81
AF327355 AAL56015 Q8IY81
DQ892321 ABM83247  
DQ895523 ABM86449  
AK000069 BAA90924 Q8IY81
AK315010 BAG37502 Q8IY81
AK296715 BAG59305 B4DKU3
AL834482 CAD39141 Q8IY81

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FTSJ3 NP_060117 M.musculus Ftsj3 56095 Gene Info NP_079586 89
R.norvegicus Ftsj3 303608   NP_001012014 89
A.gambiae AgaP_AGAP003002 1272952   XP_311882 47
S.pombe spb1 2542112   NP_593129 45
D.melanogaster CG8939 32568   NP_573099 44
C.elegans H06I04.3 175414   NP_497655 43
N.crassa NCU03669 3877666   XP_961445 41
A.thaliana AT4G25730 828678   NP_194303 41
S.cerevisiae SPB1 850304   NP_009877 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)