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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTNNBIP1, catenin, beta interacting protein 1
Sequence ID:NM_001012329
NM_020248
RefSeqGene ID:NG_029165
Entrez Gene ID:56998
Ensembl ID:ENSG00000178585

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 9908333 - 9970282

 Exon Info From UCSC:
NM_001012329
NM_020248

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9056820Full LengthBC146892catenin, beta interacting protein 1
9056824Full LengthBC146896catenin, beta interacting protein 1
100068988Full LengthBC172294catenin, beta interacting protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001012329  NP_064633  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012329 NP_001012329 Q9NSA3 ICAT
NM_020248 NP_064633 Q9NSA3 ICAT

Related Sequences

 
mRNAGenPeptSwissProt
BC014300 AAH14300 Q9NSA3
BC146892 AAI46893 Q9NSA3
BC146896 AAI46897 Q9NSA3
BC172294 AAI72294  
EU446876 ABZ92405  
AB021262 BAB03458 Q9NSA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTNNBIP1 NP_001012329 R.norvegicus Ctnnbip1 503000   XP_001078135 99
M.musculus Ctnnbip1 67087 Gene Info NP_075954 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)