Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SKA2, spindle and kinetochore associated complex subunit 2
Sequence ID:NM_001100595
NM_182620
Entrez Gene ID:348235
Ensembl ID:ENSG00000182628

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 57187366 - 57232532

 Exon Info From UCSC:
NM_001100595
NM_182620

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4685972Full LengthBC017873family with sequence similarity 33, member A
6143473Full LengthBC106003family with sequence similarity 33, member A

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100595 NP_001094065    
NM_182620 NP_872426 Q8WVK7  

Related Sequences

 
mRNAGenPeptSwissProt
BC017873 AAH17873 Q8WVK7
BC106003 AAI06004 Q8WVK7
FJ648812 ACN41865 C0KZE1
HQ447776 ADQ32261  
AK056473 BAG51725 Q8WVK7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SKA2 NP_872426 M.musculus Fam33a 66140 Gene Info NP_079653 78
R.norvegicus LOC691962 691962   XP_001080369 72
R.norvegicus Ska2 287598   NP_001009624 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)